org.proteios.core.data
Class PeakData

java.lang.Object
  org.proteios.core.data.BasicData
      org.proteios.core.data.PeakData

All Implemented Interfaces:

AnnotatableData, BatchableData, IdentifiableData

public class PeakData
extends BasicData
implements BatchableData, AnnotatableData

This represents a peak. A peak item has information about a peak in a mass spectrometry experiment.

Version:

2.0

Author:

Olle

See Also:

Peak, Peaks overview

Last modified

$Date: 2006-06-02 14:31:54Z $

Hibernate: class

table="`Peaks`" lazy="true"

Constructor Summary

PeakData()

Method Summary

AnnotationSetData	getAnnotationSet() Get the annotation set that holds the annotations for an item.
Double	getIntensity() Get the intensity.
Double	getMassToChargeRatio() Get the massToChargeRatio.
PeakListData	getPeakList() Get the PeakListData this peak is created from.
void	setAnnotationSet(AnnotationSetData annotationSet) Change the annotation set.
void	setIntensity(Double intensity) Set the intensity
void	setMassToChargeRatio(Double massToChargeRatio) Set the massToChargeRatio
void	setPeakList(PeakListData peakList) Set the PeakListData this peak is created from.

Methods inherited from class org.proteios.core.data.BasicData

equals, getId, getVersion, hashCode, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.proteios.core.data.IdentifiableData

getId, getVersion

Constructor Detail

PeakData

public PeakData()

Method Detail

getMassToChargeRatio

public Double getMassToChargeRatio()

Get the massToChargeRatio.

Returns:

the massToChargeRatio value

Hibernate: property

column="`mass_to_charge_ratio`" type="double" not-null="false"

setMassToChargeRatio

public void setMassToChargeRatio(Double massToChargeRatio)

Set the massToChargeRatio

Parameters:

massToChargeRatio - The Double massToChargeRatio value

getIntensity

public Double getIntensity()

Get the intensity.

Returns:

the intensity value

Hibernate: property

column="`intensity`" type="double" not-null="false"

setIntensity

public void setIntensity(Double intensity)

Set the intensity

Parameters:

intensity - The Double intensity value

getPeakList

public PeakListData getPeakList()

Get the PeakListData this peak is created from.

Returns:

The PeakListData item or null if not known

Hibernate: many-to-one

column="`peakListId`" not-null="false" outer-join="false"

setPeakList

public void setPeakList(PeakListData peakList)

Set the PeakListData this peak is created from.

Parameters:

peakList - The creator peakList

getAnnotationSet

public AnnotationSetData getAnnotationSet()

Description copied from interface: AnnotatableData

Get the annotation set that holds the annotations for an item.

Specified by:

getAnnotationSet in interface AnnotatableData

Returns:

An AnnotationSetData item or null if no annotations exist

setAnnotationSet

public void setAnnotationSet(AnnotationSetData annotationSet)

Description copied from interface: AnnotatableData

Change the annotation set. Use null to remove the annotations.

Specified by:

setAnnotationSet in interface AnnotatableData